Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIDKRKVVYQIYPKSYKDTTGNGVGDLRGIIEKLPYLAELGIDMVWLNPFYPSPQRDNGYDISDYTAINPDFGKMDDFEEMIEVGRQYRIDFMLDMVLNHCSIEHEWFKKALAGD-RYYQDFFILRD-----------NPTDWVSKFGGNAWSPFGDTGKYYLHLFDITQADLNWRNADVRKELFK-VVNFWRDKGVKGFRFDVINLIGKDEILENCPIND-------GKPAYTDRPITHDYLKMLNN---ASFGQADSFMTVGEMSSTTIANCILYTAPEREELSMAFNFHHLKVDYKDGQKWTIMAFDFP----ALRDLFHSWGEGMSEGNGWNALFYNNHDQPRALNRFV-DVKRFRNEGATMLAASIHLSRGTPYIYMGEEIGMLDPDYSSMDDYVDIESLNAYQIMLDE-GKSQEEAFSIIRA---KSRDNSRVPMQWD-DSTNAGFS--EGAPWLKVGKSYKE-INVAKE--KTGLIFTFYQELIRLRKQLPIIADGNYKAAF--KDNEKVYAFERHLDKQKLLVLNNFFAEKVKIKLPENYLQGQVLLSNYKDVTLDETV-TLQPYQTLAILVS |
| 3A4A Chain:A ((16-582)) | ----KEATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNPKRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYLRLFCSTQPDLNWENEDCRKAIYESAVGYWLDHGVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLNGPRIHEFHQEMNQFIRNRVKDGREIMTVGEMQHASDETKRLYTSASRHELSELFNFSHTDVGTSPLFRYNLVPFELKDWKIALAELFRY----INGTDCWSTIYLENHDQPRSITRFGDDSPKNRVISGKLLSVLLSALTGTLYVYQGQELGQINFKNWPVEKYEDVEIRNNYNAIKEEHGENSEEMKKFLEAIALISRDHARTPMQWSREEPNAGFSGPSAKPWFYLNDSFREGINVEDEIKDPNSVLNFWKEALKFRKAHKDITVYGYDFEFIDLDNKKLFSFTKKYNNKTLFAALNFSSDATDFKIPNDDSSFKLEFGNYPKKEVDASSRTLKPWEGRIYISE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166541 for 4478 contacts (-37.2/contact) +
2D Compatibility (PS) -56356 + (NN) -26417 + (LL) 304
1D Compatibility (HY) -34000 + (ID) 9600
Total energy: -292610.0 ( -65.34 by residue)
QMean score : 0.506
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