Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKLKYVSRGGLKLEKALQVFEISVADKLTIDIGASTGGFTDVMLQSGARLVYAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQKED---FKEGLPEFASIDVSFISL-----NLILPALKEILVDGGQVVALIKPQFEAGREQIGKNGIVKDKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGHGNIEFLMHLQKCQDPQNLVLDQIQDVIEKAHKEFKKNEEE |
3LCC Chain:A ((66-209)) | ---------------------------------------------------------------------------------PLGRALVPGCGGGHDVVAMASPE-RFVVGLDISESALAKA-NETYGSSP-KAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLM-----YPITDHVG------GPPYKVDVSTFEEVLVPIGFKAVSVEENPHAIPTRKGKEKLGRWKKINL------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -36278 for 980 contacts (-37.0/contact) +
2D Compatibility (PS) -13994 + (NN) 570 + (LL) 8368
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -45834.0 ( -46.77 by residue)
QMean score : 0.393
|
|
|