Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKPFIAGNWKMNKNPEEAKAFIEAVAS-KLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQV--SSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK
4BI7 Chain:A ((3-252))
-ARRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDS--VDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVAAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPE-FMTMIDILT
General information:
TITO was launched using:
RESULT:
Template:
4BI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109854 for 2104 contacts (-52.2/contact) +
2D Compatibility (PS) -27344 + (NN) -17168 + (LL) 460
1D Compatibility (HY) -21200 + (ID) 5200
Total energy: -180306.0 ( -85.70 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_4BI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BI7-query.scw
PDB file :
Tito_Scwrl_4BI7.pdb
: