Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGYTVAIVGATGAVGTQMIRQLEQSNLPIEQVKLLSSS-RSAGKILHFK-----DE-------AIRVEETT--KESFYDVDIALFSAGGSISAKFAPYAVKSGAVVVDNTSYFRQNPDVPLVVPEVNAHAMIG----------HNGIIACPNCSTIQMMIALEPIRQKWGIERVIVSTYQAVSGSGARAVEETKEQLRQVLNDNLSPDQLIATVLPCSSDQKHYPIAFNALPQIDIFTDNDYTYEEMKMTLETKKIMEDA--------TIKVSATCVRIPVLSGHSESIYIETKELASISEIKKAIANFPGAVLQDLP---S------QQIYPQAI-N--AVGHRETFVGRIRKDLDQENGVHMWVVSDNLLKGAAWNSVQIAETLHKNGLVKPAKELKFELI |
| 1YS4 Chain:A ((7-354)) | MKIKVGVLGATGSVGQRFVQLLAD--HPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYNGVPS-------------------------------MAILDNLIPFIKN--------EEEKMQTESLKLLGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMDKFDPLKDLNLPTYAKPIVIREEIDRPQPRLDRNEGNGMSIVVGRIRKDPI--FDVKYTALEHNTIRGAAGASVLNAEYFVKKYI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143908 for 2623 contacts (-54.9/contact) +
2D Compatibility (PS) -31855 + (NN) -8679 + (LL) 3464
1D Compatibility (HY) -18400 + (ID) 5900
Total energy: -205278.0 ( -78.26 by residue)
QMean score : 0.451
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