Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIKKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQ--DNSLSNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNFSMKEIYAEGDQVKGHKTISVDKGKEKEVGIVTNKAFSLPVKN-GEEKNYKAKVTLNKDNLTAPVKKGTKVGKLTAEYTGDEKDYGFLNSDLAGVDLVTKENVEKANWFVLTMRSIGGFFAGIWGSIVDTVTGWF |
3ITA Chain:A ((5-352)) | -------------------------------TVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAP--G------------QFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNK-----IRQPNRNRLLWS---SNL--NVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKT--DRIRFNESEKLLTWGFRFFETVTPIKPDAT---FVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLK-NLKASYTLTEPQLTAPLKKGQVVGTIDFQLNG-----KSI----EQRPLIVMENVEEGG---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113402 for 2987 contacts (-38.0/contact) +
2D Compatibility (PS) -37010 + (NN) -7018 + (LL) 6344
1D Compatibility (HY) -20800 + (ID) 5750
Total energy: -177636.0 ( -59.47 by residue)
QMean score : 0.621
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