Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL
4BW0 Chain:B ((25-102))
----KVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVPCASAAII-
General information:
TITO was launched using:
RESULT:
Template:
4BW0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63521 for 565 contacts (-112.4/contact) +
2D Compatibility (PS) -8402 + (NN) -2271 + (LL) 372
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -79722.0 ( -141.10 by residue)
QMean score : 0.729
(partial model without unconserved sides chains):
PDB file :
Tito_4BW0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BW0-query.scw
PDB file :
Tito_Scwrl_4BW0.pdb
: