Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSVNLSYPIGEYKPRESISKEQKDKWIQVLEEVPAKLKQAVEVMTDSQLDTPYRDGGWTVRQVVHHLADSHMNSYIRFKLSLTEETPAIRPYDEKAWSELKDSKTADPSGSLALLQELHGRWTALLRT-LTDQQFKRGFYHPDTKEIITLENALGLYVWHSHHHIAHITELSRRMGWS
3DI5 Chain:A ((5-146))----------------------TIEGFLQSWTYETESTQKMLDVLTDESLSQEIAPGHWTLGRVAWHIVTAIPVILSGTGLKFEGET---KD-----YP-----VPTSAKTIADGYRKVNTAFVEALQSEWTDKDLTTIND--FFGRPMPNSIFLMTLINHQNHHRGQMTVLMRQAGLT


General information:
TITO was launched using:
RESULT:

Template: 3DI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 550 -65524 -119.13 -464.71
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -119.13
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_3DI5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DI5-query.scw
PDB file : Tito_Scwrl_3DI5.pdb: