Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MAAHELKEALETLKETGVRITPQRHAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDASSRFDFVTSDHYHAICENCGKIVDFHYPGLDEVEQLAAHVTGFKVSHHRLEIYGVCQECSKKENH
1SMT Chain:A ((24-121))ELQAIAPEVAQSLAEFFAVLADPNRLRLLSLLARS--ELCVGDLAQAI-----GVSESAVSHQLRSLRNLRLVSYRKQG----------RHVYYQLQD-------------HHIVALYQNALDHLQEC------------------


General information:
TITO was launched using:
RESULT:

Template: 1SMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 256 -55645 -217.36 -573.65
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -217.36
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_1SMT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SMT-query.scw
PDB file : Tito_Scwrl_1SMT.pdb: