Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRTWNVCLTALLSVLLVAGSVPFHAEAKKPPKSYDEYKQVDVGKDGMVATAHPLASEIGADVLKKGGNAIDAAVAIQFALNVTEPMMSGIGGGGFMMVYDGKTKDTTIIDSRERAPAGATPDMFLDENGKAIPFSERVTKGTAVGVPGTLKGLEEALDKWGTRSMKQLITPSIKLAEKGFPIDSVLAEAISDYQEKLSR------TA-AKDVFLPNGEPLKEGDTLIQKDLAKTFKLIRSKGTDAFYKGKFAKTLSDTVQDFGGSMTEKDLENYDITIDEPIWGDYQGYQIATTPPPSSGGIFLLQMLKILDHFNLSQYDVRSWEKYQLLAETMHLSYADRASYAGDPEFVNVPLKGLLHPDYIKERQQLINLDQVNKKPKAGDPWKYQEGSANYKQVEQPKDKVEGQTTHFTVADRWGNVVSYTTTIEQL-FGTGIMVPDYGVILNNELTDFDAIPGGANEVQPNKRPLSSMTPTILFKDDKPVLTVGSPGGATIISSVLQTILYHIEYGMELKAAVEEPRIYTNSMSSYRYEDGVPKDVLSKLNGMGHKFGT--SPVDIGNVQSISIDHENGTFKGVADSSRNGAAIGINLKRK
2NLZ Chain:A ((15-539))-------------------------------------RRNVVYAKNGMVATSQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWTKG--KLHGLNGSGRAPMSLTMEAVKAKGY---EQELPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYDRVKTEWTDDVYQPWFDTFAPKGRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKEDLACYRPEWVEPISIDYRGYRVWEIPPNGQGLVA-LEALNIVKGFEFYHK--DTVDTYHKQIEAMKLAFVDGMKYVTEPSDMSVSVEQLLSDEYATERRKEIGEQALT-------PE--------------PGTP----TVYLATADGDGNMVSFIQSNY-MGFGSGVVVPGTGIAMQNRGHNFSLDPNHDNALKPGKRTYHTIIPGFLTKNDQPIGPFGVMGGFMQPQGHMQVMMNTIDFGLNPQAALDAPRWQWTNGKQVQVEPTFPVDIAQALVRRGHKIQVVLDEGAFGRGQIIWRDPTTGVLAGGTEPRTDGQVAAW-----


General information:
TITO was launched using:
RESULT:

Template: 2NLZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3392 -21807 -6.43 -42.68
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -6.43
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_2NLZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NLZ-query.scw
PDB file : Tito_Scwrl_2NLZ.pdb: