Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKYTMNEMVDITKDMLNKRGVMIEDIARIVQKLQEKYNPNLPLSVCMENVEKVLNKREIIHAVLTGLALDQLAEQKLLPEPLQHLVETDEPLYGIDEIIPLSIVNVYGSIGLTNFGYLDKEKIGIIKELDESPD-GIHTFLDDIVAALAAAAASRIAHTHQDLQDEEKEQDEKPVVS
1RFZ Chain:A ((4-164))MSEFIMNNLEQTARRWLEERGVTVEKIAELVYYLQSKYHPDLTMEECIENVNRVISKREVQNAILTGIQLDKLAEDGRLDEPLQSIIRRDEGLYGVDEILALSIVNVYGSIGFTNYGYIDKQKPGILQYLNDKSTGKCNTFLDDIVGAIAAAASSRLAHRA-----------------


General information:
TITO was launched using:
RESULT:

Template: 1RFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 759 -97235 -128.11 -607.72
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.88

3D Compatibility (PKB) : -128.11
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_1RFZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RFZ-query.scw
PDB file : Tito_Scwrl_1RFZ.pdb: