Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHLQLKKLLNHFFLEDIGTGDLTSQSIFGEQSCEAEIVAKSEGIFAGAAIIKEGFSLLDENVQSILHKKDGDMLHKGEVIAELHGPAAALLSGERVVLNLIQRLSGIATMTREAVRCLDDEQIK--ICDTRKTTPGLRMLEKYAVRAGGGYNHRFGLYDGIMIKDNHIAACGSILEACKKARQAAGHMVNIEVEIETEEQLREAIAAGADVIMFDNCPPDTVRHFAKLTPA---NIKTEASGGITLESLPAFKGTGVNYISLGFLTHSVKSLDISMDVTLSNESVEECCYVNS
5AYZ Chain:I ((10-285))LPPVTLAALVDSWLREDC-PGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQVSWFL--PEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFALKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL---------------


General information:
TITO was launched using:
RESULT:

Template: 5AYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 1404 -58665 -41.78 -216.48
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain I : 0.80

3D Compatibility (PKB) : -41.78
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_5AYZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AYZ-query.scw
PDB file : Tito_Scwrl_5AYZ.pdb: