Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTHLQAKATLHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVH-GYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWP----------------VEGKYKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQ--LLDHPVLADIAQTYNKSVAQIILRWDLQHGIITIPKSTKEHRIKENASVFDFELTQDDMNRIDALNENLRVGPDPDNFDF
2BGS Chain:A ((42-318))----------LKSGHAMPAVGLGTWRA--GSDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAME-AGIDRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHITAYSPLGSSEKNLAHDPVVEKVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRV---------


General information:
TITO was launched using:
RESULT:

Template: 2BGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1397 12892 9.23 49.97
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : 9.23
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_2BGS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BGS-query.scw
PDB file : Tito_Scwrl_2BGS.pdb: