Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
2WVJ Chain:B ((18-186))------RGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR---------------ALPACLLRDVAQE-ALGVAVIGIDEGQFFP-DIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYSKRL------GTEKEVEVIGGADKYHSVCR-----------


General information:
TITO was launched using:
RESULT:

Template: 2WVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 813 -108480 -133.43 -699.87
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -133.43
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.407

(partial model without unconserved sides chains):
PDB file : Tito_2WVJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WVJ-query.scw
PDB file : Tito_Scwrl_2WVJ.pdb: