Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKSYLITGGAGFIGLTFTKLMLRETDARI--TVLDKLTYASHPEEMEKLKQNSRFRFVKGDISVQEDIDRAFDETYDGVIHFAAESHVDRSISQAEPFITTNVMGTYRLAEAVLKGKAKKLIHISTDEVYGDLKAD----------DPAFTETTPLSPNNPYSASKASSDLLVLSYVKTHKLPAIITRCSNNYGPYQHSEKMIPTIIRHAKQGLPVPLYGDGLQIRDWLFAEDHCRAIKLILEKGTDGEVYNIGGGNERTNKELASVILKHLGCEEL-FAHVEDRKGHDRRYAINASKLKNELGWRQEV-TFEEGIARTIQWYTDNDR
1OC2 Chain:A ((3-326))QFKNIIVTGGAGFIGSNFVHYVYNN-HPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIADAELVDKLAA-KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQ-


General information:
TITO was launched using:
RESULT:

Template: 1OC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1816 44744 24.64 144.34
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : 24.64
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_1OC2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OC2-query.scw
PDB file : Tito_Scwrl_1OC2.pdb: