Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVILLPMVTFTMAYLIVDVPKPGDIRTNQVSTILASDGSEIAKIVPPEGNRVDVNLSQVPMHVRQAVIAAEDRNFYSNPGFSFTGFARAVKNNLFGGDLQGGSTITQQYVKNALVGSAQHGWSGLMRKAKELVIATKMSGEWSKDDVLQAYLNIIYFGRGAYGISAASKAYFDKPVEQLTVAEGALLAALIRRPSTLDPAVDPEGAHARWNWVLDGMVETKALSPNDRAAQVFPETVPPDLARAENQTKGPNGLIERQVTRELLELFNIDEQTLNTQGLVVTTTIDPQAQRAAEKAVAKYLDGQDPDMRAAVVSIDPHNGAVRAYYG-------------GDNANGFDFAQAGLQTGSSFKVFALVAALEQG-IGLGYQVDSSPLTVDGIKITNVEG----EGCGTCNIAEALKMSLNTSYYRLMLKLNGGPQAVADAAHQAGIASSFPGVAHTLSEDGKGGPPNN------GIVLGQ-YQTRVIDMASAYATLAASGIYHPPHFVQKVVSANGQVLFDASTADNTGDQRIPKAVADNVTAAMEPIA-----------GYSRGHNLAGGRDSAAKTGTTQFGDTTANKDAWMVGYTP--SLSTAVWVGTVKGDEP----LVTASGAAIYGSGLPSDIWKATMDGALKGTSNETFPKPTEVGGYAGVPPPPPPPEVPPSETVIQPTVEIAPGITIPI-GPPTTITLAPPPPAPPAATPTPPP--------------------------------------------------------------- |
| 1QME Chain:A ((23-702)) | ----------------------------------------------------TVPAKRGTIYDRNGVPIAEDAT----------SPNRSYPNGQFASSFIGLAQLHEN-------EDGSKSLLGTS------------------------------------GMESSLNSILAGT---------------------------------------DG----------------RTMD-----------------------------------------GKDVYTTISSPLQSFMETQMDAFQEKVKGKYMTATL-VSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKM--GDATWLDYLNRFKFGVP-TRFG--LTDEYAGQLPADNIVNIAQSSFGQGISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQK--EIVGNPVSKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPGQNVALKSGTAQIADEKNG------GYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPEHYSGIQLGEFANPILERASAMKDSLN-----------LQQSPYPMPSVKDISPGDLAEELRRNLVQPIVVGTGTKIKNSSAEEGKNLAPNQQVLILSDKAEEVPDMYGWTKETAETLAKWLNIELEFQGSGSTVQKQDVRANTAIKDIKKITLTLGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85010 for 3915 contacts (-21.7/contact) +
2D Compatibility (PS) -49674 + (NN) -32123 + (LL) 15488
1D Compatibility (HY) -6400 + (ID) 4200
Total energy: -161919.0 ( -41.36 by residue)
QMean score : 0.334
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