Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRERYYRLDERGVLRLRALMESFWSDELDRLVADAA-HYPPSQGDCAMPFEKAVVVPLDPTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAG-TVIDVDPGKRVVFTWGWEDHGDPPPGGSTVTITLTPV-DGGTEVRLVHDGLT--AQQAARHAKGWNHFLDRLVVAGQRGDAGP--DEWAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQPTAGHVSAT |
2NN5 Chain:A ((14-184)) | ---------------------------------------------------------------------------------GTENLYFQSNAMKDTFRLENQTIYFGTERAISASPQTIWRYLTETDKLKQWFPELEIGELGVNGFWRFILPDFEE--TMPFTDYAEEKYLGVTWD----------TGIIYFDLKEQAPHQTLLVFSESLPENFTTPRHKDIAGWSIVLNRLKQVVETPDAAPEKIDFPQIENHYLEKLTNLEN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49048 for 1162 contacts (-42.2/contact) +
2D Compatibility (PS) -17614 + (NN) -3851 + (LL) 20828
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -56585.0 ( -48.70 by residue)
QMean score : 0.390
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