Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
2KGY Chain:A ((11-102))
-----DYDIPTTE------NLYFQGAMAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
General information:
TITO was launched using:
RESULT:
Template:
2KGY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12104 for 769 contacts (15.7/contact) +
2D Compatibility (PS) -10131 + (NN) -5349 + (LL) 1292
1D Compatibility (HY) -6000 + (ID) 3850
Total energy: -11934.0 ( -15.52 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_2KGY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KGY-query.scw
PDB file :
Tito_Scwrl_2KGY.pdb
: