Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTALDWRSALTADEQRSVRALVTATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPRGAGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASALGLVGVRELIQMRRPLRDIPEPTIPDGVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVDTAYALAGTDN |
1WWZ Chain:A ((1-157)) | --------------------------------------------------------------------------------------------------------------------------------------------------MDEIKIEKLKKLDKKALNELIDVYMSGYEGLEEYGG-EGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYN-----------DTIELWVGEKNYGAMNLYEKFGFKKVGKSGIWVRMIKRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45605 for 1200 contacts (-38.0/contact) +
2D Compatibility (PS) -17108 + (NN) -9977 + (LL) 10036
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -68654.0 ( -57.21 by residue)
QMean score : 0.403
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