Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRT--VGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR
4ONC Chain:B ((55-282))
------------------------------LPNHVAIVMDGNGRWATQRGLARTE-GHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEMTKSNDVITINYCVNYGGRTEITEATREI-AREVAAGRLNPERITEST---IARHLQRPDIPDVDLFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRTRRFG-
General information:
TITO was launched using:
RESULT:
Template:
4ONC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130616 for 1774 contacts (-73.6/contact) +
2D Compatibility (PS) -24343 + (NN) -6562 + (LL) 2872
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -177199.0 ( -99.89 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_4ONC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ONC-query.scw
PDB file :
Tito_Scwrl_4ONC.pdb
: