Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVPTVDMGIPGASVSSRSVADRPNRKRVLLAEPRGYCAGVDRAVETVERALQKHGPPVYVRHEIVHNRHVVDTLAKAGAVFVEETEQVPEGAIVVFSAHGVAPTVHVSASERNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAPDHVQLVDGVDAVDQVTVRD------EDKVVWLSQTTLSVDETMEIVGRLRRRFPKLQDPPSDDICYATQNRQVAVKAMAPECELVIVVGSRNSSNSVRLVEVALGAGARAAHLVDWADDIDSAWLDGVTTVGVTSGASVPEVLVRGVLERLAECGYDIVQPVTTANETLVFALPRELRSPR |
3DNF Chain:A ((4-280)) | ---------------------------IIIAEHAGFCFGVKRAVKLAEESLKESQGKVYTLGPIIHNPQEVNRLKNLG-VFPSQGEEFKEGDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLG----YLRACNGKGIVVE-TLEDIGEALKHERVGIVAQTTQNEEFFKEVVGEIALWVKEVK--VINTICNATSLRQESVKKLAPEVDVMIIIGGKNSGNTRRLYYISKELNPNTYH-IETAEELQPEWFRGVKRVGISAGASTPDWIIEQVKSRIQE---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166223 for 2205 contacts (-75.4/contact) +
2D Compatibility (PS) -29124 + (NN) -11412 + (LL) 3296
1D Compatibility (HY) -21200 + (ID) 4600
Total energy: -229263.0 ( -103.97 by residue)
QMean score : 0.512
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