Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARGLQGVMLRSFGARDHTATVIETISIAPHFVRVRMVSPTLFQDAEAEPAAWLRFWFPDPNGSNTEFQRAYTISEADPAAGRFAVDVVLHDPAGPASSWARTVKPGATIAVMSLMGSSRFDVPEEQPAGYLLIGDSASIPGMNGIIETVPNDVPIEMYLEQHDDNDTLIPLAKHPRLRVRWVMRRDEKSLAEAIENRDWSDWYAWATPEAAALKCVRVRLRDEFGFPKSEIHAQAYWNAGRAMGTHRATEPAATEPEVGAAPQPESAVPAPARGSWRAQAASRLLAPLKLPLVLSGVLAALVTLAQLAPFVLLVELSRLLVSGAGAHRLFTVGFAAVGLLGTGALLAAALTLWLHVIDARFARALRLRLLSKLSRLPLGWFTSRGSGSIKKLVTDDTLALHYLVTH--AVPDAVAAVVAPVGVLV-YLFVVDWRVALVLFGPVLVYLTITSSLTIQSG--PRIVQAQRWAEKMNGEAGSYLEGQPVIRVFGAASSSFRRRLDEYIGFLVAWQRPLA-----GKKTLMDLATRPATFLWLIAATGTLLVATHRMDPVNLLPFMFLGTTFGARLLGIAYGLG-------GLRTGLLAARHLQVTLDETELAVREHP-----REPLDGEAPATVVFDHVTFGY--RPGVPVIQDVSLTLRPGTVTALVGPSGSGKSTLATLLARFHDVE---RGAIRVGGQDIRSLAADELYTRVGFVLQEAQLVHGTAAENIALAVPDAPAEQVQVAAREAQIHDRVLRLPDGYDTVLGANS-GLSGGERQRLTIARAILGDTPVLILDEATAFADPESEYLVQQALNRL--TRDRTVLVIAHRLHTITRADQIVVLDHGRIVERGTHEELLAAG--GRYCRLWDTGQGSRVAVAAAQDGTR |
| 3WMG Chain:A ((71-591)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YSVGFVGIGVFEF--IVAGSRTALFGIASERLARDLRVAAFSNLVEQDVTYFDRRKAGELGGKLNNDVQVIQYSFSKLGAVLFNLAQCV--VGIIVAFIFAPALTGVLIALSP-LVVLAVVVQMIEMSGNTKRSSEAYASAGSVAAEVFSNIRTTKAFEAERYETQRYGSKLDPL--YRLGRRRYISDGLFFGLSMLVIFCVYALALWW-----GGQLIARGSLNLGNLL------TAFFSAILGF-MGVGQAAQVWPDVTRGLGAGGELFAMIDRVPQYRRPDPGAEVVTQPL--VLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAYSFVMALPDGLDTEVGERGLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQL------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254272 for 3426 contacts (-74.2/contact) +
2D Compatibility (PS) -52361 + (NN) -25707 + (LL) 25264
1D Compatibility (HY) -40800 + (ID) 8600
Total energy: -356476.0 ( -104.05 by residue)
QMean score : 0.367
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