Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQL---GAERLWARAVDVTDKAALEGALADFC--AGNVGGGLDMMWNNAGIGEGGW-FEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQRHGVRVADVLPGLIDTAILTSTRQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK |
| 4FN4 Chain:D ((8-210)) | -KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA-DVSKKKDVE----EFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLT-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66163 for 1698 contacts (-39.0/contact) +
2D Compatibility (PS) -21101 + (NN) -7697 + (LL) 6776
1D Compatibility (HY) -10000 + (ID) 3250
Total energy: -101435.0 ( -59.74 by residue)
QMean score : 0.380
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