Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA----AAGHALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLV-DLGTRVGVATRFCAFDSGGLADAVAAAEVLVSTIPAEVAAGYA----G-TLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAMTCALAALD |
| 2D5C Chain:A ((1-259)) | ----MLRFAVLGHPVAHSLSPAMHAFALESLGL-EGSYEAWDTPLEALPGRLKEVRRAFRGVNLTLPLKEAALAHLDWVSPEAQRIGAVNTVLQVEGRLFGFNTDAPGFLEALKAGGIPLKGPALVLGAGGAGRAVAFALREAGL-EVWVWNRTPQRALALAEEFGL------RAVPL------EKAREARLLVNATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRLWTGLLPDPSGMEEAARR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183362 for 2233 contacts (-82.1/contact) +
2D Compatibility (PS) -26626 + (NN) -8923 + (LL) 688
1D Compatibility (HY) -11200 + (ID) 3800
Total energy: -233223.0 ( -104.44 by residue)
QMean score : 0.423
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