Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLGFWDIAVPIVGAPMAGGPSTPALAAAVSNAGGLGFVAGGYLSADRLADDIAAARAAT--TGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTEVGQPVYGDDDDWVRKLEVVADVRPEVVSFTFG--APPPDVVQRLSA----------LGLLVSITVTSVYEAG--------------------------VAIA-AGADSLVVQGPAAGGHRGTFAPDMEPGTESLHQLLDRIGSA-----------HDVPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAAHRAALKNPEFDATLVTRAFS-------------GRYARGLANNFTRLLDHVA---P--L--------G-Y----PEVHQMT-----------------KPI------------RAAAVQADDPH---GTNLWAGSAHRKTRP-----------G-PAADIIASLTPDVCSA |
| 4CW5 Chain:A ((19-442)) | -FKKDYNIQYAYMTGSMYRGIASEQMVIKAAKAGMLGFFGTGGLSIERIGQAIGTIRSALRQGETFGMNLLHHMMSP--------------------------------DKEVRMIDLYLKNGIHLIEASAFMGITPALVIYRAKGLSRNHDGSVSVQNKIIAKVSRPEVAEAFLNPAPAHVLERLVSDNRLTAGEAALAKEIPMADDICVE-A---------------------TLMPAMIRLRDRMMEKHGYAKKVRIGAAGGIGTPEAAAAAFLLGAEFIGTGSINQCTVEAGTSDSVKDLLQEANVQDTSYAPAGDMFEAGARVQVLKKGLFFPARANKLFDLYRQYNSLDEIDEKTKTLIEEKYFQRSFEEVYEQLKRDKSPEQIAKAEQNPKHKMAMVFKWYFSHTTRLA--LEGKSESKIDYQIHCGPALGAFNQWVKGTPLENWRNRHVDLIGKQLMEETA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119216 for 2226 contacts (-53.6/contact) +
2D Compatibility (PS) -31065 + (NN) -11658 + (LL) 3156
1D Compatibility (HY) -8400 + (ID) 3200
Total energy: -170383.0 ( -76.54 by residue)
QMean score : 0.417
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