Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIA-GVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLNTERT
4RUK Chain:C ((1-158))
MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFK----
General information:
TITO was launched using:
RESULT:
Template:
4RUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113800 for 1235 contacts (-92.1/contact) +
2D Compatibility (PS) -17347 + (NN) -9361 + (LL) 308
1D Compatibility (HY) -15600 + (ID) 3200
Total energy: -159000.0 ( -128.74 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_4RUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RUK-query.scw
PDB file :
Tito_Scwrl_4RUK.pdb
: