Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLAQTVCDARALGAQVP---EHRVL--DVSDYQDVAAFAADIHA---RHPSMDVVLNIAGVSAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSSAAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRDDPRVNRWVERFSGHAVTPEKAADKILAGVTRNR-YLVYTSADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP |
| 4CQM Chain:A ((15-255)) | ---------------LVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETV---RLL----PPRGNHAAFQADVSEARAARCLLEQVQACFSRPPS--VVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPM------GHLGDPEDVADVVAFLASEDSGYITGTSVEV--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137941 for 1942 contacts (-71.0/contact) +
2D Compatibility (PS) -23500 + (NN) 1434 + (LL) 5104
1D Compatibility (HY) -9200 + (ID) 4000
Total energy: -168103.0 ( -86.56 by residue)
QMean score : 0.515
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