Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFA-RVLGDPALPHLFFVEGGALAVENALKAAFDWKS-RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV----AFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA----EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSL-PTTADR-DELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
| 4JEZ Chain:B ((56-404)) | ----------------------------------------------------GKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSRVFTNEPALRLGRKLIDATFAERVL---------FMNSGTEANETAFKLARHYACVRHS-------PFKTKIIAFHNAFHGRSLFTVSV-GGQPKYSDGFGPKPADIIHVPF---------------NDLHAVKAVMD----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLT---TQEIA-SAF------GSTYGGNPLACAVAGATFDIINTPEVLQGIHTKRQQFVQHLQA-IDEQFDIFS----DIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170012 for 2877 contacts (-59.1/contact) +
2D Compatibility (PS) -36042 + (NN) -17569 + (LL) 7876
1D Compatibility (HY) -20800 + (ID) 6100
Total energy: -242647.0 ( -84.34 by residue)
QMean score : 0.420
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