Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTDNDDRIKLEASWKEALREEFDKPYMKQL-GEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKEL-NRDLNIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
1UDH Chain:A ((28-244))---------IDDAWRPLMEPELANPLTAHLLAEYNR--RCQTEEVLPPREDVFSWTRYCTPDEVRVVIIGQDPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIR-PDPRVHCVLKFSHPSPLSKV-PFGTCQHFLVANRYLETRSISPIDWSV---


General information:
TITO was launched using:
RESULT:

Template: 1UDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -81448 for 1703 contacts (-47.8/contact) +
2D Compatibility (PS) -23237 + (NN) -14873 + (LL) 780
1D Compatibility (HY) -18000 + (ID) 4600
Total energy: -141378.0 ( -83.02 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_1UDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UDH-query.scw
PDB file : Tito_Scwrl_1UDH.pdb: