Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------MSRFEIAFSGQL-VAGARPEVVKANLAK--LFQADAQRIELLFSGRRVVIKNNL----DAASAEKYRSVLERAGAIAVVAEMEVEEVVMAPPPAQTTPVEAPQTRAATGTSAPAGRLQVAPRDGYMAAFAEVDAPDFGLAPVGADLQDAKA----EAEAPKLDLSRFSVAPVGSDMGQARSEPAAPAPDTSHLRLQD------------------ |
4J1J Chain:A ((3-235)) | TGPDFIYDDRPAAVSSTFNPEKGYMDFITAYGKNINADNVRIFFLNHKKAKDSLKGSPKVEVDLQFGTLRVKVVNNHNPRNRDNPVADNAITLHRLSGYLAKWCFDEIDHGQIEEAEVKSKVVIPLAEAKGCKWGDGVALYLAFAPG-----AEMFLKDFEFYPLAIDIQRVVKDGMDITFMRKVLKQRYGTKTADDWMISEVTAIQSAVKVVAKLPWAKAGFTAAAKNFLAKFNISV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8549 for 1356 contacts (6.3/contact) +
2D Compatibility (PS) -18954 + (NN) -1483 + (LL) 720
1D Compatibility (HY) -4000 + (ID) 1550
Total energy: -16718.0 ( -12.33 by residue)
QMean score : 0.237
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