Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFRKTLLITGASSGFGQALA-REALDAGH--RVVGTVRSEEARSALE------AVAPGQAFGRLLDVTDLAAIEPTVAAIERDI-GPLDVLVNSAGYGHEGILEESPLAEMRRQFEVNLFGAVAMIQAVLPYMRRRRRGHILNITSMGGYITMPGIAYYCGSKFALEGVSEALGKEVAGLGIAVTAVAPGSFRTDWAGRSMVRSPRTIADYDALFDPVRQARQEKSGKQ-----PGDPRKAARAMLQAIDAENPPAHLLLGSDALGLVRQKLKALEEEIAAWEEVTRSTDG |
| 1JTV Chain:A ((2-267)) | ---RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSV---AAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT--------GSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNYVTAMHREVFG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112519 for 1914 contacts (-58.8/contact) +
2D Compatibility (PS) -26488 + (NN) -10053 + (LL) 916
1D Compatibility (HY) -17600 + (ID) 4400
Total energy: -170144.0 ( -88.89 by residue)
QMean score : 0.434
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