Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNLLLSPLAVGNLALRNRIVMAPMTRSRAQQPGDVPTALNALYYAQRAGAGLIVSEGTQISHLGQGYAYTPGIYSEAQLAGWRQVTEAVHAAGGLIAAQLWHVGRMSHRSLQAGGEAPIAPSPIQAKAQVFIADGQGGGSMAPADAPREMTLEDIRRVRDEFVRAARNALDAGFDLVELHGANGYLIDQFLASASNRRSDAYGGSLENRARFLLEIVDALVAAVGAERVGLRLSPWGTINDMHDDEPEAMTLYL--AEALQRRGIAYLHLAEWEWSG--GPAYPQGFRERLRERFRAPLIVCGNYDAERAEAILQAGLADAVAIGRPFIANPDLVERIRLGAPLAEANQARFYGGDAAGYTDYPTLGQSATA |
| 4OT7 Chain:A ((24-379)) | ----LFDPIRFGAFTAKNRIWMAPLTRGRATR-DHVPTEIMAEYYAQRASAGLIISEATGISQEGLGWPYAPGIWSDAQVEAWLPITQAVHDAGGLIFAQLWHMGRMV-----------------------------------------ALRLDEIPRLLDDYEKAARHALKAGFDGVQIHAANGYLIDEFI---------EYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPYGVFN-------GIVQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVFKPPLVLNQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFFEKAPLTKDVIETWYTQTPKGYTDYPLL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193728 for 2580 contacts (-75.1/contact) +
2D Compatibility (PS) -32880 + (NN) -16117 + (LL) 2172
1D Compatibility (HY) -29600 + (ID) 7100
Total energy: -277253.0 ( -107.46 by residue)
QMean score : 0.539
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