Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISSRTGVRQR-HIAGDLGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVGALAFDLSAACTGFVYGLASVGSLISAGLADSALLVGVDTFSHTLDPADR--STRALFGDGAGAVVLRAGDAEEEGALLAFDLGSDGHQFDLLMTPAVSRA------ERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRWPKIVPTMD |
| 3H78 Chain:A ((27-352)) | -----ILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCSDRGRNLSILLGDGAGAVVVSAGESLEDG-LLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLA--MFWPDIQPGQRVLVLTYGSGATWGAALYRKP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245303 for 2811 contacts (-87.3/contact) +
2D Compatibility (PS) -32252 + (NN) -2852 + (LL) 976
1D Compatibility (HY) -20000 + (ID) 5700
Total energy: -305131.0 ( -108.55 by residue)
QMean score : 0.498
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