Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTATDIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESC--NLWQGAQV-ILSTALSSIEGRVLGVDSRGALRLEVDGVE-QGFSGGELSLRLRQ |
| 1WNL Chain:B ((36-234)) | --------------------------------------------------------------------------------------------------VIVADKQTMGHGRLNRKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSI-DGRIKWPNDVLVNYKKIAGVLVEGKGD-----KIVLGIGLNVNNKVPNGA----TSMKLELGSEVP---LLSVF-RSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDG--SFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122494 for 1491 contacts (-82.2/contact) +
2D Compatibility (PS) -20458 + (NN) -4716 + (LL) 7528
1D Compatibility (HY) -18400 + (ID) 3650
Total energy: -162190.0 ( -108.78 by residue)
QMean score : 0.505
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