Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLAGGHVLVEGVPGLG----KTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPVFTH----------LLLADEINRAPAKTQAALLEVMQERQVTLE--GRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYP---AEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
| 1G8P Chain:A ((18-350)) | ----RPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGD----LRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS-------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88735 for 2334 contacts (-38.0/contact) +
2D Compatibility (PS) -32279 + (NN) -10206 + (LL) 1964
1D Compatibility (HY) -4800 + (ID) 3150
Total energy: -137206.0 ( -58.79 by residue)
QMean score : 0.335
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