Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATLFDPIVLGDLELPNRIVMAPLTRCRADEGRVPNALMAEYYAQRADAG-LILSEATAVTPMGVGYPDTPGIWSDDQVRGWSNVTKAVHAAGGRIFLQLWHVGRISDPLYL-NGELPVAPSAIAAEGHVSLVRPKRP---YVTPRALDTEEIADIVEAYRQGAERAKAAGFDGVEIHGANGYLLDQFLQDSTNKRTDRYGGSIENRARLLLEVTDAAISVWGAQRVGVHLAPRADSHDMGDSNRLETFSHVARELGK-----------------RGIAF-ICAREAQADDSIGVALKKAFGGPYIANEQFTLDSANAILAKGDADAVAFGVPFIANPDLVERLRQGAELNPPRPETFYTGG-TEGYLDYPTLA |
3HGO Chain:A ((18-390)) | ---LFSPYKMGKFNLSHRVVLAPMTRCRA-LNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGYPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDYLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQP-----RLGSEEEEA--RLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGYTDYPFL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159860 for 2917 contacts (-54.8/contact) +
2D Compatibility (PS) -37114 + (NN) -21120 + (LL) 728
1D Compatibility (HY) -26800 + (ID) 7500
Total energy: -251666.0 ( -86.28 by residue)
QMean score : 0.633
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