Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFCRTDLDPVVEIPARAENVGETTMSTTLVKGDVKVDTVEHLLSAMAGLGIDNAYVELSASEVPIMDGSAGPFVFLIQSAGLQEQEAAKKFIRIKREVSVEEGDKRAVFVPFDGFKVSFEIDFDHPVFRGRTQQASVDFSSTSFVKEVSRARTFGFMRDIEYLRSQNLALGGSVENAIVVDENRVLNEDGLRYEDEFVKHKILDAIGDLYLLGNSLIGEFRGFKSGHALNNQLLRTLIADKDAWEVVTFEDARTAPISYMRPAAAV |
2IER Chain:B ((4-263)) | ---EKTVKEKLSFEGVGIHTGEYSKLIIHPEKEGTGIRFFKNG----VYIPARHEFVVHTNHSTDLGFKGQRIKTVEHILSVLHLLEITNVTIEVIGNEIPILDGSGWEFYEAIRKNILNQNREIDYFV-VEEPIIVEDEGRLIKAEPSDTLEVTYEGEFKN--FLGRQKFTFVEGNE----EEIVLARTFAFDWEIEHIKKVGLGKGGSLKNTLVLGKDKVYNPEGLRYENEPVRHKVFDLIGDLYLLGSPVKGKFYSFRGGHSLNVKLVKEL----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104802 for 2259 contacts (-46.4/contact) +
2D Compatibility (PS) -27446 + (NN) -4266 + (LL) 3748
1D Compatibility (HY) -18800 + (ID) 4950
Total energy: -156516.0 ( -69.29 by residue)
QMean score : 0.455
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