Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDTGRRILLNCDMGESFGAWRMGDDVHSMPLVDQANLACGFHAGDPLTMRRAVELAVRHGVSIGAH-PAYPDLSGFGRRSLACSAEEVHAMVLYQIGALDAFCRSLGTQVAYVKPHGALYNDLVGDDELLRAVLDACAAYRKGLPLMVLALADNGRELELADEADVPLLFEAFADRAYLPDGRLAPRRLGGAVHHDPQRIIEQALAIARGEAFPDYDGNPLRLTADSLCVHGDNPQSL-AVLRRLRAALDSL |
| 2NLY Chain:A ((3-226)) | ---MKRAAIIIDDFGGDV---KGVDDFLTGEI----PVTVAVMPFLE-HSTKQAEIAQAAGLEVIVHMPLEPKPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSK-------------IVENEKIMRAILEVVKE--KNAFIIDSGTSPHSLIPQLAEELEVPYATRSIFLDNTHSSRKEVIKNMRKLAKKAKQG--SEPIGIGHV-------GVRGDETYAGIRSMLDEFQAESIQLVPVSQLLP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128890 for 1857 contacts (-69.4/contact) +
2D Compatibility (PS) -22732 + (NN) -5246 + (LL) 2336
1D Compatibility (HY) -1200 + (ID) 1650
Total energy: -157382.0 ( -84.75 by residue)
QMean score : 0.317
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