Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGLSWDWDKSWWQTSTGRLTGYWDAGYTYW-EGGDEGAGKHSLSFAPVFVYEFAGDSIKPFIEAGIGVAAFSGTRVGDQNLGSSLNFEDRIGAGLKFANGQSVGVRAIHYSNAGL----KQPNDGIESYSLFYKIPI------------------------------------------------------------------ |
| 2F1C Chain:X ((4-283)) | NDWHFNIGAMYEIENVGLAEPSVYFNAANGPWRIALAYYQEGPVDYSKRGTWFDRPELEVHYQFLEND-DFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDD---LRFNGWLSMYKFAN----DLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNDFNRVGLFYGYDFQNGLSVSLEYAFEWQDDKFHYAGVGVNYSFHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190 for 1037 contacts (-0.2/contact) +
2D Compatibility (PS) -17317 + (NN) -1938 + (LL) 568
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -24327.0 ( -23.46 by residue)
QMean score : 0.051
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