Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKNKTFLAAALVALAASFPVHAATDYTRTRYPIVLSHGLFGFKSVGPVDYWHAIVPALEKDGAKVFATSQSPVNSNEVRGEQLLAQVEEVLALTGAEKVNLIGHSQGGMTVRYVAGVAPQLVASVTTMGTPHKGTPVADAVTGFSEFLGPIGTEVIASAVEALFSVVDIVDGGEWVKGDALAALNSLNTPGTARFNQRFPQAIPASACGQGAETVAGVRYYSMSGTGSLTNALDPSSAGLAVTGLLF-GEANDGLVGQCSSHLGSVVKDNYRMDHLDEVNQLLGLVSLFESDPTQVYRQHANRLRNVGL
3W9U Chain:A ((5-290))----------------------------STKYPIVLVHGLAGFNEIVGFPYFYGIADALRQDGHQVFTASLSAFNSNEVRGKQLWQFVQTLLQETQAKKVNFIGHSQGPLACRYVAANYPDSVASVTSINGVNHGSEIADLYRRIMR-KDSIPEYIVEKVLNAFGTIISTFSG------DAIAALESLTTEQVTEFNNKYPQALPKTPGGEGDEIVNGVHYYCFGSYIQGLNLLDPTHAAMRVLNTFFTEKQNDGLVGRSSMRLGKLIKDDYAQDHIDMVNQVAGLVG-YNEDIVAIYTQHAKYLASKQL


General information:
TITO was launched using:
RESULT:

Template: 3W9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84622 for 2437 contacts (-34.7/contact) +
2D Compatibility (PS) -28649 + (NN) -6375 + (LL) 3032
1D Compatibility (HY) -23600 + (ID) 5800
Total energy: -146014.0 ( -59.92 by residue)
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_3W9U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W9U-query.scw
PDB file : Tito_Scwrl_3W9U.pdb: