Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA
3M4G Chain:J ((4-71))
---GHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLP-----------
General information:
TITO was launched using:
RESULT:
Template:
3M4G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45810 for 423 contacts (-108.3/contact) +
2D Compatibility (PS) -7545 + (NN) -2536 + (LL) -52
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -70493.0 ( -166.65 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_3M4G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M4G-query.scw
PDB file :
Tito_Scwrl_3M4G.pdb
: