Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGRSEERLGPLLR-------GQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD----------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR------EGDCAMVTYNLNERAERPVIEYAAAHAKGILVKKALASGHAC--------------------LGAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA |
1AFS Chain:A ((2-291)) | ----DSISL-RVALNDGNFIPVLGFGTTVPEK------------VAKDEVIKATKIAIDNGFRHFDSAYLYE-VEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTF--------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ-SKMLDYCKSKDIILVSYCTLGSSRDKTWVDQKSPVLLDDPVLCAIAKKYKQTPALVALRYQLQRGV--VPLIRSFNAKRIKELTQVFEFQLASE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100414 for 1979 contacts (-50.7/contact) +
2D Compatibility (PS) -25819 + (NN) -6272 + (LL) 1572
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -142883.0 ( -72.20 by residue)
QMean score : 0.511
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