Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKVSALVVDDAPFIRDLMKKGLRD-NFPGLHIEEAVNGRKAQQLLSRQNVDLILCDWEMPEMSGLELLTWCRAQENLKTTPFIMVTSRGDKENVVQAIQAGVSDYIGKPFSNDQLVAKIKKALSRSGKLEALAAHAPRREIASGMANDSLAALTGGRAEVIKPAASPAKPAPAPKPASAPQASARPAGSGNPLGQAQLRLPQSSMPCVIKAVSLKEAQLVVKRADPLPQVLESAVLDLEENSDVARLNGYLHAIAALEPKPDSDWLLLTLRFVDRDPQKLDYLSRLIARGSTQKHYVPGA |
1F4V Chain:A ((8-127)) | ------LVVDDFSTMRRIVRNLLKELGFN--NVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73239 for 913 contacts (-80.2/contact) +
2D Compatibility (PS) -12998 + (NN) -10230 + (LL) 11256
1D Compatibility (HY) -10400 + (ID) 2300
Total energy: -97911.0 ( -107.24 by residue)
QMean score : 0.680
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