Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGVSEGTRGCSDRQPGALTQGHSCSRKMNASRCLSEEVGSLRPLT----MAVLSASFVVGVLGNGLVPWVTV-FRMARTVSTVCFFHLALADFMLSLSLPILVYYIVSRQWLLGEWACKLYTGFVFLTFSTSNCLLVLISVDRCISVLYPVWALNHRTEQRASWLAFGVWLLAAALCSAHLKFRTTRKWNGCMQCYLQFNLENETAQMWTQEVFGRQMAVIMAHFLLGFLGPLAIIGTCAHLIRAKLLREGWVHANRPKRLLLVLVSALSAGSHLT
4DKL Chain:A ((14-208))
-------------------------------------------MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTF-----SHPTWYWENLLK-----ICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYT
General information:
TITO was launched using:
RESULT:
Template:
4DKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154579 for 1284 contacts (-120.4/contact) +
2D Compatibility (PS) -19328 + (NN) -5345 + (LL) 2536
1D Compatibility (HY) -22000 + (ID) 3050
Total energy: -201766.0 ( -157.14 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_4DKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DKL-query.scw
PDB file :
Tito_Scwrl_4DKL.pdb
: