Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVKPSWGPGPSEGVTAVPTSDLGEIHNWTELLDLFNHTLSECHVELSQSTKRVVLFALYLAMFVVGLVENLLVI-CVNWRGSGRAGLMNLYILNMAIADLGIVLSLPVWMLEVTLDYTWLWGSFSCRFTHYFYFVNMYSSIFFLVCLSVDRYVTLTSASPSWQRYQHRVRRAMCAGI--WVLSAIIPLPEVVHIQLVEGPEPMCLFMAPFETYS-TWALAVALSTTILGFLLPFPLITVFNVLTACRLRQPGQPKSR-RHCLLLCAYVAVFVMCWLPYHVTLLLLTLHGTH-ISLHCHLVHLLYFFYDVIDCFSMLHCVINPILYNFLSPHFRGRLLNAVVHYLPKDQTKAGTCASSSSCSTQHSIIITKGDSQPAAAAPHPEPSLSFQAHHLLPNTSPISPTQPLTPS |
| 4XT1 Chain:A ((35-310)) | ---------------------------------------------DVLNQSKPVTLF-LYGVVFLFGSIGNFLVIFTITWRRRIQCS-GDVYFINLAAADLLFVCTLPLWM-QYLLD------SVPCTLLTACFYVAMFASLCFITEIALDRYYAIV-----YMRYRP-VKQACLFSIFWWIFAVIIAIP---HFMVVTKKDNQC--MTDYDYLEVSYPIILNVELMLGAFVIPLSVIS-YCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285065 for 1952 contacts (-146.0/contact) +
2D Compatibility (PS) -27578 + (NN) -16351 + (LL) 6668
1D Compatibility (HY) -40000 + (ID) 4150
Total energy: -366476.0 ( -187.74 by residue)
QMean score : 0.293
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