Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNNTTCIQPSMISSMALPIIYILLCIVGVFGNTLSQWIFLTKIGKKTSTHIYLSHLVTANLLVCSAMPFMSIYFLKGFQWEYQSAQCRVVNFLGTLSM-HASMFVSLLILSWIAISRYATLMQKDSSQETTSCYEKIFYGHLLK--KFRQPNFARKLCIYIWGVVLGIIIPVTVYYSVIEATEGEESLCYNRQMELGAMISQIAGLIGTTFIGF--SFLVVLTSYYSFVSHLRKIRTCTSIMEKDLTYSSVKRHLLVIQILLIVCFLPYSIFKPIFYVLHQRDNCQQLNYLIETKNILTCLASARSSTDPIIFLLLDKTFKKTLYNLFTKSNSAHMQSYG |
| 4N6H Chain:A ((121-411)) | ----------SLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLME-TWPFGELLCKAV-----LSIDYYNMFTSIFTLTMMSVDRY------------------IAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMV-MAVTRPRDG--AVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFV-IVWTLVDIDRRDPL--VVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245195 for 2194 contacts (-111.8/contact) +
2D Compatibility (PS) -28770 + (NN) -1800 + (LL) 2352
1D Compatibility (HY) -26400 + (ID) 4100
Total energy: -303913.0 ( -138.52 by residue)
QMean score : 0.317
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