Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNSTHRGMHTSLHLWNRSSYRLHSNASESLGKGYSDGGCYEQLFVSPEVFVTLGVISLLENILVIVAIAKNKNLHSPMYFFICSLAVADMLVSVSNGSETIVITLLNSTDTDAQSFTVNIDNVIDSVICSSLLASICSLLSIAVDRYFTIFYALQYHNIMTVKRVGIIISCIWAACTVSGILFIIYSDS--------SAVIICLIT--------MFFTMLA-------LMASLYVHMFLMARLHIKRIAVLPGTGAIRQGANMK---GAITLTILIGVFVVCWAPFFLHLI--FYISCPQNPYCVCFMSHFNLYLILIMCNSIIDPLIYALRSQELRKTFKEIICCYPLGGLCDLSSRY |
| 3VGA Chain:A ((12-303)) | -------------------------------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFVLVLTQ-------SSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLP--LHIINCFTFFCPDCSHAPLWLMY--LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226178 for 1838 contacts (-123.1/contact) +
2D Compatibility (PS) -25946 + (NN) -2909 + (LL) 3068
1D Compatibility (HY) -26000 + (ID) 4250
Total energy: -282215.0 ( -153.54 by residue)
QMean score : 0.239
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