Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDNITSITEFLLLGFPVGPRIQMLLFGLFSLFYVFTLLGNGTILGLISLDSRLHAPMYFFLSHLAVVDIAYACNTVPRMLVNLLHPAKPISFAGRMMQTFLFS--TFAVTECL-LLVVMSYDLYVAICHPLRYLAIMTWRVCITLAVTSWTTGVLLSLIHLVLLLPLPFCRPQKIYHFFCEILAVLKLACADTHINENMVLAGAISGLVGPLSTIVVSYMCILCAILQIQSREVQR-KAFC-TCFSHLCVIGLFYGT--------AIIMYVGPRYGNPKEQKKYLLL-FHSLFNPMLNPLICSLRNSEVKNTLKRVLGVERAL |
| 4GBR Chain:A ((13-286)) | ------------------------------SLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL--TKTWTF-GNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTS------FLPIQMHWYRATHQEAINCYA--EETCCDFFTNQAYAIASSIVSFYVPLVIMVFVY----SRVFQEAKRQLQKIDKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLI-YCRSPDFRIAFQELLCL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214116 for 1892 contacts (-113.2/contact) +
2D Compatibility (PS) -26194 + (NN) -7908 + (LL) 4688
1D Compatibility (HY) -22400 + (ID) 3350
Total energy: -269280.0 ( -142.33 by residue)
QMean score : 0.214
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