Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFL--LAVMAYDRYTAICHPLRYTNLMSPKICGLM-TAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCS-------DTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGM--------------YYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE
1F88 Chain:A ((43-326))-------------------------YMFLLIMLGFPINFLTLYVTVQ----HKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFAT--LGGEIALWSLVVLAIERYVVVCKPM--SNFRFGENHAIMGVAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA------SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPI-FMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPS


General information:
TITO was launched using:
RESULT:

Template: 1F88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -214548 for 1947 contacts (-110.2/contact) +
2D Compatibility (PS) -26161 + (NN) -6660 + (LL) 3340
1D Compatibility (HY) -24800 + (ID) 3300
Total energy: -272129.0 ( -139.77 by residue)
QMean score : 0.303

(partial model without unconserved sides chains):
PDB file : Tito_1F88.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F88-query.scw
PDB file : Tito_Scwrl_1F88.pdb: