Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESENRTVIREFILLGLTQSQDIQLLVFVLVLIFYFIILPGNFLIIFTIKSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSAKKIISYRGCITQLFFLHFLGGGEGLL-LVVMAFDRYIAICRPLHYPTVMNPRTCYAMMLALWLGGFVHSIIQVVLILRLPF-CGPNQLDNFFCDVPQVIKLAC------------TDTFVVELLMV-FNSGLMTL-LCFLGLLASYAVILCRIRGSSSEAKNKAMSTCITHIIVIFFMF------GPGIFIYTRPFRAF-PADKVVSLFHTVIFPLLNPVIYTLRNQEVKASMKKVFNKHIA |
| 3CAP Chain:A ((53-317)) | ---------------------------------------PINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFAT-LGGEIALWSLVVLAIERYVVVCKPMS-----NFRF-----------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180100 for 1707 contacts (-105.5/contact) +
2D Compatibility (PS) -24181 + (NN) -5265 + (LL) 6720
1D Compatibility (HY) -21600 + (ID) 3400
Total energy: -227826.0 ( -133.47 by residue)
QMean score : 0.184
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