Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVATNNVTEIIFVGFSQNWSEQRVISVMFLLMYTAVVLGNGLIVVTILASKVLTSPMYFFLSYLSFVEICYCSVMAPKLIFDSFIKRKVISLKGC-LTQMF-SLHFFGGTEAF-LLMVMAYDRYVAICKPLHYMAIMNQRMCGLLVRIAWGGGLLHSVGQTFLIFQLPFCGPNIMDHYFCDVHPVL-----ELACADTFFISLLIITNGG---SISVVSFFV-LMASYLIILHFLRSHN----------------LEGQHKALSTCASHVTVVDLFFIPCSLVYIRPCVT--LPADKIVAVFYTV--VTPLLNPVIYSFRNAEVKNAMRRFIGGKVI |
| 2YCX Chain:A ((9-294)) | -----------------QWEAG--MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP---FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSF--------LP-----IMMHWWRDEDPQALKCYQDPGCCD-------FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220069 for 1815 contacts (-121.3/contact) +
2D Compatibility (PS) -25208 + (NN) -2733 + (LL) 4392
1D Compatibility (HY) -27200 + (ID) 3550
Total energy: -274368.0 ( -151.17 by residue)
QMean score : 0.180
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